Package edu.msu.cme.rdp.classifier.train

Class Taxonomy

java.lang.Object
edu.msu.cme.rdp.classifier.train.Taxonomy
public class Taxonomy extends Object
A Taxonomy holds the raw taxon information.

  • Constructor Details

    • Taxonomy

      public Taxonomy(int id, String name, int pid, int d, String level)
      Creates a new instance of Taxonomy

  • Method Details

    • getTaxID

      public int getTaxID()
      Returns the taxID.

    • getTaxName

      public String getTaxName()
      Returns the taxon name.

    • getParentID

      public int getParentID()
      Returns the taxID of the parent taxon.

    • getDepth

      public int getDepth()
      Returns the depth of the current taxon from root taxon.

    • getHierLevel

      public String getHierLevel()
      Returns the hierarchy rank level.

    • setDepth

      public void setDepth(int d)

    • changeRank

      public void changeRank(String s)