format_vienna.hpp File Reference

Provides the seqan3::format_vienna. More...

#include <cstdio>
#include <iterator>
#include <stack>
#include <string>
#include <string_view>
#include <type_traits>
#include <vector>
#include <seqan3/alphabet/adaptation/char.hpp>
#include <seqan3/alphabet/structure/wuss.hpp>
#include <seqan3/core/char_operations/predicate.hpp>
#include <seqan3/core/type_traits/range.hpp>
#include <seqan3/io/detail/misc.hpp>
#include <seqan3/io/stream/iterator.hpp>
#include <seqan3/io/structure_file/detail.hpp>
#include <seqan3/io/structure_file/input_format_concept.hpp>
#include <seqan3/io/structure_file/input_options.hpp>
#include <seqan3/io/structure_file/output_format_concept.hpp>
#include <seqan3/io/structure_file/output_options.hpp>
#include <seqan3/range/detail/misc.hpp>
#include <seqan3/range/views/char_to.hpp>
#include <seqan3/range/views/istreambuf.hpp>
#include <seqan3/range/views/take.hpp>
#include <seqan3/range/views/take_line.hpp>
#include <seqan3/range/views/take_until.hpp>
#include <seqan3/range/views/to_char.hpp>
#include <seqan3/range/views/to.hpp>
#include <seqan3/std/algorithm>
#include <seqan3/std/ranges>

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Classes
class	seqan3::format_vienna
	The Vienna format (dot bracket notation) for RNA sequences with secondary structure. More...

Namespaces
	seqan3
	The main SeqAn3 namespace.

Detailed Description

Provides the seqan3::format_vienna.

Author

Jörg Winkler <j.winkler AT fu-berlin.de>