gap_scheme.hpp File Reference

Provides seqan3::gap_scheme. More...

#include <stdexcept>
#include <seqan3/core/concept/cereal.hpp>
#include <seqan3/core/concept/core_language.hpp>
#include <seqan3/core/detail/strong_type.hpp>
#include <seqan3/std/concepts>

Include dependency graph for gap_scheme.hpp:

Go to the source code of this file.

Classes
struct	seqan3::gap_open_score< score_type >
	A strong type of underlying type score_type that represents an additional score (usually negative) that is incurred once additionaly per stretch of consecutive gaps. More...
class	seqan3::gap_scheme< score_t >
	A scheme for representing and computing scores against gap characters. More...
struct	seqan3::gap_score< score_type >
	A strong type of underlying type score_type that represents the score of any character against a gap character. More...

Namespaces
	seqan3
	The main SeqAn3 namespace.

Detailed Description

Provides seqan3::gap_scheme.

Author

Hannes Hauswedell <hannes.hauswedell AT fu-berlin.de>